STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_026514Homeobox unc-4-like protein. (535 aa)    
Predicted Functional Partners:
BpHYR1_029481
LIM domain-binding 2 isoform X1.
    
 0.742
BpHYR1_000532
Serum response factor-like protein.
    
 0.680
BpHYR1_048370
Groucho-1-like isoform X1.
    
 
 0.652
BpHYR1_032497
Transcription factor.
    
  0.626
BpHYR1_022774
GATA-binding factor 2-like isoform X2.
    
 0.478
BpHYR1_039283
GATA-binding factor A isoform X2.
    
 0.478
BpHYR1_002929
GATA-binding factor A isoform X4.
    
 0.478
BpHYR1_052309
LIM homeobox Lhx3-like.
   
0.474
BpHYR1_020578
T-box transcription factor TBX20.
    
 
 0.439
BpHYR1_005657
Achaete-scute complex T5.
    
 0.437
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.