STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_045268Cystathionine beta-synthase-like isoform X1. (527 aa)    
Predicted Functional Partners:
BpHYR1_049356
Cystathionine gamma-lyase-like.
 
 0.993
BpHYR1_018887
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.924
BpHYR1_050313
Phosphoserine aminotransferase.
  
 
 0.916
BpHYR1_054105
Cysteine dioxygenase.
   
 
 0.913
BpHYR1_040933
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.912
BpHYR1_052692
Maltose acetyltransferase.
   
 0.909
BpHYR1_037006
Adenosylhomocysteinase.
  
 0.909
BpHYR1_013963
Maltose acetyltransferase.
   
 0.909
BpHYR1_019347
Serine cytosolic-like.
  
 
 0.894
BpHYR1_029135
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.894
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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