STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_004317USP domain-containing protein. (613 aa)    
Predicted Functional Partners:
BpHYR1_052833
Set1 Ash2 histone methyltransferase complex subunit ASH2.
   
 
 0.957
BpHYR1_048625
Retinoblastoma-binding 5-like protein.
    
 
 0.953
BpHYR1_019962
Dpy-30-like protein.
    
 
 0.932
BpHYR1_010914
Histone-lysine N-methyltransferase SETD1A isoform X2.
   
 
 0.900
BpHYR1_010913
Histone-lysine N-methyltransferase SETD1B isoform X2.
   
 
 0.900
BpHYR1_037439
Guanine nucleotide-binding subunit beta-like.
    
 
 0.834
BpHYR1_029426
WD repeat-containing 82-like.
    
 
 0.834
BpHYR1_051875
Smarcd1.
   
 
 0.800
BpHYR1_039363
AT-rich interactive domain-containing 4B.
    
 
 0.769
BpHYR1_041824
Ubiquitin-60S ribosomal L40.
    
   0.742
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.