STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_051601COP9 signalosome complex subunit 7b-like. (258 aa)    
Predicted Functional Partners:
BpHYR1_003034
COP9 signalosome complex subunit 4.
   
 0.998
BpHYR1_025072
COP9 signalosome complex subunit 1.
   
 0.998
BpHYR1_013525
COP9 signalosome complex subunit 3.
    
 0.998
BpHYR1_020736
COP9 signalosome complex subunit 6.
    
 0.997
BpHYR1_024070
COP9 signalosome complex subunit 2 isoform X2.
    
 0.996
BpHYR1_013722
COP9 signalosome complex subunit 5.
    
 0.995
BpHYR1_024006
Phosphatase 1 regulatory subunit 42.
    
 0.978
BpHYR1_026856
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 0.929
BpHYR1_052768
Cullin-4A; Belongs to the cullin family.
    
 0.922
BpHYR1_007792
26S proteasome non-ATPase regulatory subunit 7-like.
    
 0.894
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.