STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_003351Cryptochrome DASH-like. (519 aa)    
Predicted Functional Partners:
BpHYR1_037272
PAS domain-containing protein.
   
 0.944
BpHYR1_039635
Uncharacterized protein.
   
 0.905
BpHYR1_036824
Circadian locomoter output cycles kaput.
    
 0.901
BpHYR1_011965
Casein kinase I isoform epsilon.
    
 0.894
BpHYR1_031348
WD_REPEATS_REGION domain-containing protein.
   
 0.777
BpHYR1_014080
Serine threonine-kinase VRK1; Belongs to the protein kinase superfamily.
    
 0.713
BpHYR1_033459
Mucin-5AC isoform X5.
    
 0.713
BpHYR1_005862
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A.
    
 0.713
BpHYR1_035833
Aryl hydrocarbon receptor nuclear translocator-like protein.
    
 0.699
BpHYR1_024037
Transcription factor EB isoform X2.
    
 0.698
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.