STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_005755Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (236 aa)    
Predicted Functional Partners:
BpHYR1_013193
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
  
 
0.986
BpHYR1_033636
Ubiquitin fusion degradation 1-like protein.
   
 
 0.984
BpHYR1_020187
Endoplasmic reticulum lectin 1 isoform X1.
    
 0.983
BpHYR1_049355
Nuclear localization 4-like protein.
    
 
 0.983
BpHYR1_028966
E3 ubiquitin-ligase synoviolin isoform X2.
   
 0.983
BpHYR1_005922
OS-9-like isoform X2.
    
 0.983
BpHYR1_007818
E3 ubiquitin-ligase AMFR-like.
   
 0.983
BpHYR1_014450
TPR repeat.
   
 0.974
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.974
BpHYR1_028968
Sel-1-like protein.
   
 0.974
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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