STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_040313Myosin light chain smooth muscle-like; Belongs to the protein kinase superfamily. (342 aa)    
Predicted Functional Partners:
BpHYR1_030790
Muscle M-line assembly unc-89 isoform X7.
   
 0.841
BpHYR1_029124
Muscle M-line assembly unc-89-like.
   
 0.841
BpHYR1_020072
Titin isoform X5.
   
 0.841
BpHYR1_020076
Muscle M-line assembly unc-89.
   
 0.841
BpHYR1_046798
Muscle M-line assembly unc-89.
    
 0.833
BpHYR1_029464
WD repeat-containing 18.
   
 0.822
BpHYR1_041485
Testis-expressed sequence 10 isoform X1.
   
 0.792
BpHYR1_047123
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.741
BpHYR1_037784
Muscle M-line assembly unc-89.
   
 0.672
BpHYR1_012120
Muscle M-line assembly unc-89-like.
   
0.672
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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