STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_011246RNA 3-terminal phosphate cyclase. (354 aa)    
Predicted Functional Partners:
BpHYR1_019778
Cirhin.
   
 0.991
BpHYR1_039238
Periodic tryptophan 2-like protein.
   
 
 0.991
BpHYR1_047366
U3 small nucleolar ribonucleo IMP4.
   
 
 0.987
BpHYR1_017132
Bystin.
   
 
 0.986
BpHYR1_010588
WD repeat-containing 43-like.
   
 0.985
BpHYR1_020468
U3 small nucleolar RNA-associated 15-like protein.
   
 0.984
BpHYR1_009218
WD repeat-containing 75-like.
   
 0.982
BpHYR1_025758
HEAT repeat-containing 1.
   
 0.982
BpHYR1_014213
Ribosomal RNA-processing 7-like protein.
   
 0.982
BpHYR1_028461
U3 small nucleolar RNA-associated 6-like protein.
   
 
 0.982
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.