STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_049379Uncharacterized protein. (541 aa)    
Predicted Functional Partners:
BpHYR1_008714
Intersectin-1 isoform X7.
    
 0.625
BpHYR1_008715
Intersectin-2 isoform X1.
    
 0.625
BpHYR1_023255
Transcriptional adapter 3.
    
 0.615
BpHYR1_046337
Nuclear receptor corepressor 1-like.
    
 0.601
BpHYR1_019804
Von Willebrand factor type EGF and pentraxin domain-containing 1-like isoform X1.
   
 0.589
BpHYR1_025986
TAF6-like RNA polymerase II p300 CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 0.584
BpHYR1_007788
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.578
BpHYR1_049077
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.578
BpHYR1_016761
Transcription initiation factor TFIID subunit 9-like.
    
  0.570
BpHYR1_012244
Spectrin alpha non-erythrocytic 1.
    
 0.567
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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