STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_045753Nucleoside diphosphate kinase-like protein; Belongs to the NDK family. (206 aa)    
Predicted Functional Partners:
BpHYR1_044767
Putative 28S ribosomal mitochondrial.
  
 0.938
BpHYR1_013258
28S ribosomal mitochondrial isoform X1.
  
  0.926
BpHYR1_004100
40S ribosomal mitochondrial; Belongs to the universal ribosomal protein uS12 family.
  
 0.924
BpHYR1_032936
Mitochondrial ribosomal s22.
   
 0.923
BpHYR1_011312
40S ribosomal S20.
  
  0.917
BpHYR1_030840
40S ribosomal S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.915
BpHYR1_001381
28S ribosomal mitochondrial.
  
 0.911
BpHYR1_028312
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.909
BpHYR1_053349
Putative 28S ribosomal mitochondrial.
   
  0.906
BpHYR1_025314
28S ribosomal mitochondrial; Belongs to the universal ribosomal protein uS15 family.
  
  0.902
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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