STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_026069Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)    
Predicted Functional Partners:
BpHYR1_039507
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.996
BpHYR1_007059
Cyclin; Belongs to the cyclin family.
   
 0.965
BpHYR1_015426
Anaphase-promoting complex subunit 4-like.
    
 0.962
BpHYR1_038366
Anaphase-promoting complex subunit 2-like; Belongs to the cullin family.
    
 0.950
BpHYR1_052182
E3 ubiquitin-ligase TRIP12-like isoform X4.
    
 0.948
BpHYR1_004098
Baculoviral IAP repeat-containing 5-like.
   
 0.939
BpHYR1_039628
Anaphase-promoting complex subunit 5 isoform X1.
    
 0.933
BpHYR1_013435
Anaphase-promoting complex subunit 1.
    
 0.912
BpHYR1_048406
Anaphase-promoting complex subunit 7-like.
    
  0.907
BpHYR1_039716
Mitotic checkpoint serine threonine-kinase BUB1.
   
 0.906
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.