STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_007499Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family. (567 aa)    
Predicted Functional Partners:
BpHYR1_049843
Chitobiosyldiphosphodolichol beta-mannosyltransferase.
   
 
 0.691
BpHYR1_030309
GDP-Man:Man(3) c(2)-PP-Dol alpha-1-2-mannosyltransferase.
   
 
 0.686
BpHYR1_004729
Alpha-1-3 1-6-mannosyltransferase ALG2.
   
 
 0.656
BpHYR1_003639
UDP-N-acetylglucosamine transferase subunit ALG13-like protein.
      
 0.538
BpHYR1_015339
RNA-binding.
      
 0.537
BpHYR1_021818
Bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13.
      
 0.530
BpHYR1_015004
28S ribosomal mitochondrial; Belongs to the bacterial ribosomal protein bS18 family.
      
 0.463
BpHYR1_018517
NADH dehydrogenase (Ubiquinone) complex assembly factor 6.
      
 0.461
BpHYR1_049208
Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.
      
 0.450
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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