STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_042397Arsenite S-adenosylmethyltransferase. (272 aa)    
Predicted Functional Partners:
BpHYR1_010022
Squalene-hopene cyclase.
   
 0.888
BpHYR1_039546
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.854
BpHYR1_012947
Squalene synthase.
   
 0.829
BpHYR1_030775
Eukaryotic translation initiation factor 2 subunit 3.
  
 0.761
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.740
BpHYR1_054043
Choline-phosphate cytidylyltransferase A-like isoform X1.
  
 
 0.737
BpHYR1_006647
S-phase kinase-associated 1; Belongs to the SKP1 family.
    
 0.729
BpHYR1_031792
Choline kinase alpha isoform X2.
    
 0.727
BpHYR1_053427
Ethanolamine kinase 1-like.
  
 
 0.710
BpHYR1_025182
Multifunctional methyltransferase subunit TRM112.
   
 0.697
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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