STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_001770Charged multivesicular body 1a. (453 aa)    
Predicted Functional Partners:
BpHYR1_010573
Charged multivesicular body 2a.
   
0.991
BpHYR1_018520
Charged multivesicular body 3.
   
 0.985
BpHYR1_032935
Charged multivesicular body 5.
   
 0.984
BpHYR1_033139
Vacuolar sorting-associated VTA1-like protein.
    
 0.977
BpHYR1_036003
Uncharacterized protein.
    
 0.977
BpHYR1_044803
Vacuolar sorting-associated 4B; Belongs to the AAA ATPase family.
   
 0.958
BpHYR1_022090
Vacuolar sorting-associated 4B isoform X1; Belongs to the AAA ATPase family.
   
 0.958
BpHYR1_026094
Charged multivesicular body 6.
   
 0.933
BpHYR1_034234
MIT domain-containing 1 isoform X2.
   
 0.932
BpHYR1_008215
Charged multivesicular body 4b.
    
 0.930
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.