STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_052094N-alpha-acetyltransferase auxiliary subunit-like. (86 aa)    
Predicted Functional Partners:
BpHYR1_045872
N-alpha-acetyltransferase auxiliary subunit.
    
 0.996
BpHYR1_022762
Small nuclear ribonucleoprotein Sm D2.
   
 0.992
BpHYR1_004052
Small nuclear ribonucleoprotein Sm D3.
   
 0.992
BpHYR1_006783
Putative small nuclear ribonucleo F.
   
 0.992
BpHYR1_002519
N-alpha-acetyltransferase 30.
    
 0.991
BpHYR1_025856
Small nuclear ribonucleoprotein G.
   
 0.990
BpHYR1_052137
U7 snRNA-associated Sm LSm10.
   
 0.979
BpHYR1_039723
U5 small nuclear ribonucleo component-like protein.
   
 0.978
BpHYR1_009053
Splicing factor 3B subunit 2.
   
 0.974
BpHYR1_022211
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.973
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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