STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_047596Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (344 aa)    
Predicted Functional Partners:
BpHYR1_040458
Golgin subfamily A member 7.
    
 0.812
BpHYR1_054442
Protection of telomeres 1.
    
 0.722
BpHYR1_013310
GTPase HRas-like.
    
 0.667
BpHYR1_047407
Cold shock domain-containing E1-like isoform X1.
    
 0.667
BpHYR1_024213
Cold shock domain-containing E1 isoform X3.
    
 0.667
BpHYR1_033061
Ras-related Ral-a.
    
 0.667
BpHYR1_033058
Ras-related ralB-A-like.
    
 0.667
BpHYR1_013108
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
     
 0.648
BpHYR1_024559
NmrA-like family domain-containing 1.
     
 0.610
BpHYR1_001797
DNA repair RAD50.
    
 0.598
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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