STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_031166Putative helicase senataxin. (254 aa)    
Predicted Functional Partners:
BpHYR1_014783
Splicing arginine serine-rich 15 isoform X1.
   
 
 0.895
BpHYR1_014779
Splicing arginine serine-rich 15 isoform X1.
   
 
 0.895
BpHYR1_013285
Serine threonine-kinase SMG1; Belongs to the PI3/PI4-kinase family.
   
 
  0.795
BpHYR1_013263
Breast cancer type 1 susceptibility.
    
 
 0.762
BpHYR1_042266
Regulator of nonsense transcripts 2 isoform X1.
   
 0.734
BpHYR1_012604
ATP-dependent helicase brm-like isoform X2.
   
 
 0.727
BpHYR1_033057
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.727
BpHYR1_038152
Transcription elongation factor SPT5 isoform X1.
    
 
 0.698
BpHYR1_050220
Nuclear cap-binding protein subunit 2.
    
 
 0.636
BpHYR1_042246
Nipped-B protein.
   
    0.613
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.