STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_018847Poly [ADP-ribose] polymerase. (736 aa)    
Predicted Functional Partners:
BpHYR1_034347
Poly(ADP-ribose) glycohydrolase-like.
  
 
 0.805
BpHYR1_011515
Poly(ADP-ribose) glycohydrolase-like.
  
 
 0.796
BpHYR1_003442
Poly(ADP-ribose) glycohydrolase.
  
 
 0.773
BpHYR1_047188
DNA repair complementing XP-C cells-like protein.
    
 0.761
BpHYR1_037920
Poly [ADP-ribose] polymerase.
  
 
 
0.754
BpHYR1_047962
Poly(ADP-ribose) glycohydrolase-like.
    
 0.730
BpHYR1_017783
Replication A 32 kDa subunit.
   
 0.726
BpHYR1_046097
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.706
BpHYR1_018978
Caspase-7 isoform X1; Belongs to the peptidase C14A family.
    
 0.705
BpHYR1_022207
Caspase-2 isoform X1; Belongs to the peptidase C14A family.
    
 0.705
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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