STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_024433Transposon Tf2-12 poly. (609 aa)    
Predicted Functional Partners:
BpHYR1_037551
Transcription factor E2F4.
   
 0.733
BpHYR1_032580
Histone H3.
    
 0.688
BpHYR1_000963
Histone H3; Belongs to the histone H3 family.
    
 0.688
BpHYR1_044759
Histone-like.
    
 0.688
BpHYR1_011892
Histone H3.
    
 0.688
BpHYR1_030167
Histone-like.
    
 0.688
BpHYR1_011199
Histone H3; Belongs to the histone H3 family.
    
 0.688
BpHYR1_028460
Histone H3; Belongs to the histone H3 family.
    
 0.688
BpHYR1_037586
YY1-associated factor 2.
    
 0.678
BpHYR1_040551
Zinc C3HC4 type (RING finger) domain containing.
    
 0.652
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.