STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_010856Transcription factor E2F8. (445 aa)    
Predicted Functional Partners:
BpHYR1_052138
Transcription factor Dp-1 isoform X1.
    
 
 0.777
BpHYR1_000826
Retinoblastoma 1.
   
 
 0.700
BpHYR1_027561
Retinoblastoma 1.
   
 
 0.700
BpHYR1_018780
Cell division control 6-like protein.
   
  
 0.624
BpHYR1_007059
Cyclin; Belongs to the cyclin family.
   
 
 0.598
BpHYR1_037551
Transcription factor E2F4.
   
 0.572
BpHYR1_000334
Myelin transcription factor 1 isoform X1.
      
 0.542
BpHYR1_037710
Dual specificity kinase TTK isoform X3.
   
  
 0.541
BpHYR1_014253
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.518
BpHYR1_039716
Mitotic checkpoint serine threonine-kinase BUB1.
   
  
 0.491
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.