STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_041814Nucleosome assembly 1-like 4 isoform X2; Belongs to the nucleosome assembly protein (NAP) family. (588 aa)    
Predicted Functional Partners:
BpHYR1_023032
Histone H2A; Belongs to the histone H2A family.
   
 
 0.774
BpHYR1_016508
Histone H2A; Belongs to the histone H2A family.
   
 
 0.774
BpHYR1_030884
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.713
BpHYR1_035824
Importin-9.
   
 
 0.701
BpHYR1_001187
60S ribosomal L39.
   
   0.609
BpHYR1_034069
SET isoform X2; Belongs to the nucleosome assembly protein (NAP) family.
   
 
0.593
BpHYR1_037360
Core histone macro-isoform X2.
    
 
 0.591
BpHYR1_019865
Glycogen synthase kinase-3 beta isoform X2; Belongs to the protein kinase superfamily.
    
   0.583
BpHYR1_037325
SDA1-like protein.
    
   0.581
BpHYR1_034421
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
    
   0.581
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.