STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_024682Pseudouridylate synthase 7-like protein. (590 aa)    
Predicted Functional Partners:
BpHYR1_051391
39S ribosomal mitochondrial.
   
   0.950
BpHYR1_034376
RNA methyltransferase.
   
   0.949
BpHYR1_011265
tRNA modification GTPase mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
   0.945
BpHYR1_042610
Putative 39S ribosomal mitochondrial; Belongs to the universal ribosomal protein uL24 family.
   
   0.944
BpHYR1_024980
39S ribosomal mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
   0.944
BpHYR1_008214
39S ribosomal mitochondrial.
    
   0.943
BpHYR1_046657
Mitochondrial assembly of ribosomal large subunit 1.
    
   0.943
BpHYR1_049121
39S ribosomal mitochondrial-like.
    
   0.943
BpHYR1_034924
Nucleolar complex 3-like protein.
   
   0.917
BpHYR1_044599
60S ribosomal L23; Belongs to the universal ribosomal protein uL14 family.
   
   0.913
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.