STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_015303WD repeat-containing 20. (72 aa)    
Predicted Functional Partners:
BpHYR1_035917
WD repeat-containing 48 isoform X2.
    
 0.995
BpHYR1_038133
Uncharacterized protein.
   
 0.964
BpHYR1_049600
Putative trichohyalin-like.
   
 0.964
BpHYR1_054256
Ubiquitin carboxyl-terminal hydrolase.
   
 0.964
BpHYR1_016761
Transcription initiation factor TFIID subunit 9-like.
    
 0.694
BpHYR1_025986
TAF6-like RNA polymerase II p300 CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 0.693
BpHYR1_022734
E3 SUMO-ligase 2-like.
   
 0.693
BpHYR1_039716
Mitotic checkpoint serine threonine-kinase BUB1.
   
 0.687
BpHYR1_046186
Symplekin.
    
 0.685
BpHYR1_045757
WD repeat-containing 90.
    
  0.674
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.