STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_028897Neuralized 4. (289 aa)    
Predicted Functional Partners:
BpHYR1_023358
Cullin-associated NEDD8-dissociated.
     
 0.627
BpHYR1_001548
Cullin-associated NEDD8-dissociated.
     
 0.627
BpHYR1_038852
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
     
 0.612
BpHYR1_024596
Coiled-coil domain-containing protein.
     
 0.593
BpHYR1_013548
UV excision repair RAD23-like protein.
    
 0.557
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.548
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
    
 0.548
BpHYR1_012615
Ubiquilin-1 isoform X1.
    
  0.548
BpHYR1_032348
E3 ubiquitin-ligase MIB2-like.
   
 0.443
BpHYR1_032347
E3 ubiquitin-ligase MIB2.
   
 0.443
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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