STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_029574Patched domain-containing 3. (866 aa)    
Predicted Functional Partners:
BpHYR1_015167
Niemann-Pick C1.
  
  
 
0.670
BpHYR1_044058
Niemann-Pick C1.
  
  
 
0.669
BpHYR1_003817
Ecdysteroid-regulated 16 kDa-like.
   
 
  0.668
BpHYR1_011139
Epididymal secretory E1.
   
 
  0.668
BpHYR1_011130
Epididymal secretory E1.
   
 
  0.668
BpHYR1_034857
Epididymal secretory E1.
   
 
  0.668
BpHYR1_044358
Epididymal secretory E1.
   
 
  0.668
BpHYR1_010594
Niemann-Pick C1.
  
  
 
0.667
BpHYR1_030588
Niemann-Pick C1.
  
  
 
0.663
BpHYR1_049376
Niemann-Pick C1.
  
  
 
0.662
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.