STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_017727Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (532 aa)    
Predicted Functional Partners:
BpHYR1_052221
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.996
BpHYR1_037824
LTV1-like protein.
   
 0.995
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.995
BpHYR1_023404
40S ribosomal S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.991
BpHYR1_028300
40S ribosomal S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.981
BpHYR1_026534
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.980
BpHYR1_026704
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.978
BpHYR1_010284
40S ribosomal S3.
   
 0.972
BpHYR1_027209
40S ribosomal S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.971
BpHYR1_026088
Methylosome 50.
   
 
 0.970
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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