STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_023137THO complex subunit 3. (320 aa)    
Predicted Functional Partners:
BpHYR1_049048
THO complex subunit.
   
 0.998
BpHYR1_015580
THO complex subunit 2 isoform X3.
    
 0.998
BpHYR1_022409
THO complex subunit 5-like protein.
    
 0.997
BpHYR1_048057
THO complex subunit 1.
    
 0.997
BpHYR1_007890
THO complex subunit 5-like protein.
    
 0.979
BpHYR1_001995
THO complex subunit 4.
   
 0.952
BpHYR1_045754
THO complex subunit 4.
   
 0.952
BpHYR1_037675
ATP-dependent RNA helicase DDX39A.
    
 0.903
BpHYR1_017196
Spliceosome RNA helicase DDX39B.
    
 0.903
BpHYR1_037396
Spliceosome RNA helicase Ddx39b.
    
 0.903
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.