STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_008615Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
BpHYR1_027414
Zinc finger C3H1 domain-containing.
   
 
 0.749
BpHYR1_004537
Superkiller viralicidic activity 2-like 2.
   
 
 0.576
BpHYR1_017147
RNA-binding with serine-rich domain 1.
    
 
 0.510
BpHYR1_021826
Polyadenylate-binding 2.
    
 
 0.510
BpHYR1_015131
Polyadenylate-binding 2 isoform X1.
    
 
 0.510
BpHYR1_051361
Helicase SKI2W.
   
 
 0.479
BpHYR1_043297
YTH domain-containing family 2.
    
 
 0.448
BpHYR1_043330
YTH domain.
    
 
 0.448
BpHYR1_017666
YTH domain-containing family 2.
    
 
 0.448
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.