STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_004457Glutamate--cysteine ligase catalytic subunit. (618 aa)    
Predicted Functional Partners:
BpHYR1_017951
Glutamate--cysteine ligase regulatory subunit-like.
   
 0.947
BpHYR1_015978
Glutamate--cysteine ligase regulatory subunit.
   
 0.947
BpHYR1_045268
Cystathionine beta-synthase-like isoform X1.
   
 0.894
BpHYR1_038155
Cysteine synthase.
   
 0.876
BpHYR1_049356
Cystathionine gamma-lyase-like.
    
 0.874
BpHYR1_033038
Cytosolic non-specific dipeptidase.
     
 0.810
BpHYR1_025441
Succinate-semialdehyde mitochondrial; Belongs to the aldehyde dehydrogenase family.
   
 
 0.798
BpHYR1_028120
Aspartate aminotransferase.
     
 0.794
BpHYR1_029157
5-oxoprolinase.
     
 0.793
BpHYR1_002404
Glutamate mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.791
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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