STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_014930Artemis. (654 aa)    
Predicted Functional Partners:
BpHYR1_039390
X-ray repair cross-complementing 5-like.
    
 0.980
BpHYR1_004763
X-ray repair cross-complementing.
   
 0.975
BpHYR1_052691
DNA-dependent kinase catalytic subunit-like.
    
 0.961
BpHYR1_052690
DNA-dependent kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.961
BpHYR1_052697
DNA-dependent kinase catalytic subunit.
    
 0.961
BpHYR1_036069
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.936
BpHYR1_046186
Symplekin.
   
 0.920
BpHYR1_012901
DNA ligase 4; Belongs to the ATP-dependent DNA ligase family.
   
 0.913
BpHYR1_047500
Pre-mRNA cleavage complex 2 Pcf11-like isoform X1.
   
 0.864
BpHYR1_047671
Fanconi anemia group M isoform X1.
  
 0.863
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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