STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_005514A disintegrin and metallo ase with thrombospondin motifs 7 isoform X2. (138 aa)    
Predicted Functional Partners:
BpHYR1_042418
GDP-fucose O-fucosyltransferase 2.
     
 0.558
BpHYR1_034902
Glucosylceramidase.
   
 
  0.492
BpHYR1_046799
Ceramide synthase 1-like.
     
 0.481
BpHYR1_004764
Ceramide synthase 1.
     
 0.481
BpHYR1_036569
Inner ear-specific collagen-like isoform X5.
    
 0.442
BpHYR1_030305
Collagen alpha-1(IV) chain.
    
 0.442
BpHYR1_030307
Collagen alpha-1(IV) chain.
    
 0.442
BpHYR1_048293
Complement C1q tumor necrosis factor.
    
 0.442
BpHYR1_032989
Von Willebrand factor type EGF and pentraxin domain-containing 1-like.
  
  0.438
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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