STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_000884Heparan sulfate glucosamine 3-O-sulfotransferase 6. (289 aa)    
Predicted Functional Partners:
BpHYR1_044239
Heparan sulfate glucosamine 3-O-sulfotransferase 5.
  
  
0.830
BpHYR1_002195
Glypican-4; Belongs to the glypican family.
     
 0.823
BpHYR1_005051
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.798
BpHYR1_016369
D-glucuronyl C5-epimerase.
      
 0.538
BpHYR1_035928
Anosmin-1.
      
 0.530
BpHYR1_023632
Basement membrane-specific heparan sulfate proteoglycan core isoform X8.
     
 0.512
BpHYR1_023634
Basement membrane-specific heparan sulfate proteoglycan core.
     
 0.512
BpHYR1_039740
Agrin.
     
 0.414
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.