STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_042170Von Willebrand factor type EGF and pentraxin domain-containing 1. (395 aa)    
Predicted Functional Partners:
BpHYR1_040356
Delta.
  
  0.656
BpHYR1_030897
Neurogenic locus delta.
  
  0.634
BpHYR1_014729
LIX1.
   
 0.626
BpHYR1_006641
Fat.
  
  0.617
BpHYR1_028606
Arginine-glutamic acid dipeptide repeats-like isoform X1.
    
 0.613
BpHYR1_011965
Casein kinase I isoform epsilon.
    
  0.607
BpHYR1_003767
Neurogenic locus notch 1.
  
  0.576
BpHYR1_020114
Neurogenic locus notch-like protein.
  
     0.530
BpHYR1_020113
Neurogenic locus notch-like protein.
  
     0.523
BpHYR1_054306
Neurogenic locus notch 1-like protein.
  
     0.513
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.