BpHYR1_000645 protein (Brachionus plicatilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BpHYR1_000645

Kinesin-associated 3-like. (822 aa)

Predicted Functional Partners:

BpHYR1_044207

0.934

BpHYR1_034018

0.934

BpHYR1_047454

0.934

BpHYR1_004090

0.934

BpHYR1_030556

0.934

BpHYR1_007641

0.864

BpHYR1_005880

0.851

BpHYR1_036184

0.851

BpHYR1_017728

0.851

BpHYR1_017731

0.851

Your Current Organism:

Brachionus plicatilis

NCBI taxonomy Id: 10195
Other names: B. plicatilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BpHYR1_000645	BpHYR1_004090	A0A3M7SGW9	A0A3M7RUY2	Kinesin-associated 3-like.	Kinesin KIF3B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.934
BpHYR1_000645	BpHYR1_005880	A0A3M7SGW9	A0A3M7QED8	Kinesin-associated 3-like.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.851
BpHYR1_000645	BpHYR1_007641	A0A3M7SGW9	A0A3M7RXB2	Kinesin-associated 3-like.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.864
BpHYR1_000645	BpHYR1_017728	A0A3M7SGW9	A0A3M7S6U9	Kinesin-associated 3-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.851
BpHYR1_000645	BpHYR1_017731	A0A3M7SGW9	A0A3M7S709	Kinesin-associated 3-like.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.851
BpHYR1_000645	BpHYR1_030556	A0A3M7SGW9	A0A3M7SRD7	Kinesin-associated 3-like.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.934
BpHYR1_000645	BpHYR1_034018	A0A3M7SGW9	A0A3M7PIS7	Kinesin-associated 3-like.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.934
BpHYR1_000645	BpHYR1_036184	A0A3M7SGW9	A0A3M7RJR9	Kinesin-associated 3-like.	Guanine nucleotide-binding subunit gamma-1.	0.851
BpHYR1_000645	BpHYR1_044207	A0A3M7SGW9	A0A3M7PGY4	Kinesin-associated 3-like.	Kinesin KIF3B.	0.934
BpHYR1_000645	BpHYR1_047454	A0A3M7SGW9	A0A3M7QJX6	Kinesin-associated 3-like.	Kinesin KIF3B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.934
BpHYR1_004090	BpHYR1_000645	A0A3M7RUY2	A0A3M7SGW9	Kinesin KIF3B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated 3-like.	0.934
BpHYR1_005880	BpHYR1_000645	A0A3M7QED8	A0A3M7SGW9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated 3-like.	0.851
BpHYR1_007641	BpHYR1_000645	A0A3M7RXB2	A0A3M7SGW9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated 3-like.	0.864
BpHYR1_017728	BpHYR1_000645	A0A3M7S6U9	A0A3M7SGW9	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Kinesin-associated 3-like.	0.851
BpHYR1_017731	BpHYR1_000645	A0A3M7S709	A0A3M7SGW9	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Kinesin-associated 3-like.	0.851
BpHYR1_030556	BpHYR1_000645	A0A3M7SRD7	A0A3M7SGW9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated 3-like.	0.934
BpHYR1_034018	BpHYR1_000645	A0A3M7PIS7	A0A3M7SGW9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated 3-like.	0.934
BpHYR1_036184	BpHYR1_000645	A0A3M7RJR9	A0A3M7SGW9	Guanine nucleotide-binding subunit gamma-1.	Kinesin-associated 3-like.	0.851
BpHYR1_044207	BpHYR1_000645	A0A3M7PGY4	A0A3M7SGW9	Kinesin KIF3B.	Kinesin-associated 3-like.	0.934
BpHYR1_047454	BpHYR1_000645	A0A3M7QJX6	A0A3M7SGW9	Kinesin KIF3B isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-associated 3-like.	0.934