STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_025687Hexosyltransferase. (441 aa)    
Predicted Functional Partners:
BpHYR1_029492
Dystroglycan isoform X1.
     
 0.549
BpHYR1_015142
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
  0.510
BpHYR1_051387
Sphingosine kinase 1.
     
 0.505
BpHYR1_026408
Sphingosine kinase 1.
     
 0.505
BpHYR1_046645
Alpha-galactosidase.
   
 
  0.497
BpHYR1_036217
Polypeptide N-acetylgalactosaminyltransferase.
    
  0.492
BpHYR1_039355
Ceramide kinase.
     
 0.484
BpHYR1_018445
Alpha 1-4-glycosyltransferase family.
   
 
 0.473
BpHYR1_008816
Glycosyltransferase CAZy family GT32.
   
 
 0.473
BpHYR1_040482
Lactosylceramide 4-alpha-galactosyltransferase-like.
   
 
 0.473
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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