STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_022660Lipopolysaccharide-induced tumor necrosis factor-alpha-like protein. (127 aa)    
Predicted Functional Partners:
BpHYR1_047671
Fanconi anemia group M isoform X1.
    
  0.850
BpHYR1_047678
Fanconi anemia group M.
    
  0.850
BpHYR1_054095
Lin-54-like protein.
    
 0.616
BpHYR1_047661
Transcriptional activator Myb-like isoform X3.
   
  0.602
BpHYR1_051695
Lin-9-like protein.
    
 0.593
BpHYR1_048466
Epidermal growth factor receptor.
    
 0.580
BpHYR1_014087
Histone-binding RBBP4 isoform X2.
    
 0.514
BpHYR1_004147
Histone-binding RBBP4 isoform X2.
    
 0.514
BpHYR1_036702
Deoxyuridine 5-triphosphate mitochondrial isoform X2.
    
 0.473
BpHYR1_017783
Replication A 32 kDa subunit.
   
 0.468
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.