STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_045282Amino acid transporter. (490 aa)    
Predicted Functional Partners:
BpHYR1_020249
Alpha-aminoadipic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.582
BpHYR1_038281
Sodium-dependent dopamine transporter.
    
 0.554
BpHYR1_054200
Sodium-dependent serotonin transporter.
    
 0.554
BpHYR1_005085
4-aminobutyrate mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.550
BpHYR1_004668
Alanine--glyoxylate aminotransferase mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.547
BpHYR1_023899
Beta-ureidopropionase.
    
 0.535
BpHYR1_024327
Thiosulfate.
     
 0.522
BpHYR1_033038
Cytosolic non-specific dipeptidase.
    
  0.504
BpHYR1_023829
Glycerate kinase.
    
  0.498
BpHYR1_032732
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.491
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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