STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_030276Serine arginine repetitive matrix 2-like isoform X1. (584 aa)    
Predicted Functional Partners:
BpHYR1_035918
Pre-mRNA-splicing factor CWC22-like protein.
    
 0.994
BpHYR1_044731
Pre-mRNA-splicing factor syf2.
    
 0.993
BpHYR1_039723
U5 small nuclear ribonucleo component-like protein.
    
 
 0.993
BpHYR1_007793
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
 0.992
BpHYR1_047309
Cell division cycle 5.
   
 
 0.992
BpHYR1_027404
Coiled-coil domain-containing 94.
   
 0.990
BpHYR1_024594
BUD31-like protein.
    
 
 0.990
BpHYR1_044022
Pre-mRNA-splicing factor SLU7.
    
 0.987
BpHYR1_006783
Putative small nuclear ribonucleo F.
    
 0.986
BpHYR1_036008
Pre-mRNA-processing factor 19.
    
 
 0.985
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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