STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_013265Beta-beta-carotene 15-15-monooxygenase. (252 aa)    
Predicted Functional Partners:
BpHYR1_012947
Squalene synthase.
    
 0.752
BpHYR1_022599
Patatin-like phospholipase domain-containing 2.
     
 0.705
BpHYR1_013803
Dehydrogenase reductase SDR family member 4.
     
 0.704
BpHYR1_042943
Dehydrogenase reductase SDR family 7-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.700
BpHYR1_049377
2-acylglycerol O-acyltransferase 2.
   
 
 0.670
BpHYR1_044708
Actin-binding anillin-like isoform X2.
   
 
 0.650
BpHYR1_018517
NADH dehydrogenase (Ubiquinone) complex assembly factor 6.
    
 0.647
BpHYR1_030344
Aldehyde mitochondrial-like; Belongs to the aldehyde dehydrogenase family.
    
 0.601
BpHYR1_036852
Aldehyde dehydrogenase family 16 member A1.
    
 0.601
BpHYR1_006593
Putative serine threonine-kinase pats1.
   
 0.595
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.