STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_016930Spondin. (1058 aa)    
Predicted Functional Partners:
BpHYR1_042418
GDP-fucose O-fucosyltransferase 2.
     
 0.745
BpHYR1_026637
Uncharacterized protein.
     
 0.605
BpHYR1_005450
Papilin isoform X1.
     
0.605
BpHYR1_003458
Uncharacterized protein.
     
 0.579
BpHYR1_004771
Amyloid beta A4 isoform X5.
   
 
 0.547
BpHYR1_044708
Actin-binding anillin-like isoform X2.
      
 0.501
BpHYR1_006981
Uncharacterized protein.
     
 0.493
BpHYR1_009399
Low-density lipo receptor-related 11.
     
 0.493
BpHYR1_006141
Kunitz Bovine pancreatic trypsin inhibitor domain.
     
0.493
BpHYR1_024219
Glyco-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.473
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.