STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_012641Sequestosome-1 isoform X1. (437 aa)    
Predicted Functional Partners:
BpHYR1_044758
TNF receptor-associated factor 6.
    
 0.983
BpHYR1_003983
UBA domain-containing protein.
    
 0.970
BpHYR1_018205
Kinase C iota type isoform X1.
    
 0.913
BpHYR1_011220
Kinase C iota type.
    
 0.913
BpHYR1_003303
TNF receptor-associated factor 2 isoform X2.
    
 0.886
BpHYR1_046961
Gamma-aminobutyric acid receptor-associated.
   
 0.865
BpHYR1_035619
Gamma-aminobutyric acid receptor-associated-like 2.
   
 0.865
BpHYR1_046960
Gamma-aminobutyric acid receptor-associated-like 2.
   
 0.865
gabarap
Gamma-aminobutyric acid receptor-associated-like 2.
   
 0.865
BpHYR1_012019
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.852
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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