STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_032928Zinc finger C3H1 type-like. (251 aa)    
Predicted Functional Partners:
BpHYR1_035512
Exosome complex component RRP43.
    
  0.906
BpHYR1_027830
M7-mRNA hydrolase.
   
 0.824
BpHYR1_043744
mRNA-decapping enzyme 1A-like.
    
 0.774
BpHYR1_022001
14-3-3 epsilon; Belongs to the 14-3-3 family.
   
 0.758
BpHYR1_042602
14-3-3 zeta isoform X2; Belongs to the 14-3-3 family.
   
 0.758
BpHYR1_048353
MAP kinase-activated kinase 2 isoform X1; Belongs to the protein kinase superfamily.
    
 0.755
BpHYR1_019452
MAP kinase-activated kinase 2 isoform X1; Belongs to the protein kinase superfamily.
    
 0.755
BpHYR1_019451
MAP kinase-activated kinase 2; Belongs to the protein kinase superfamily.
    
 0.755
BpHYR1_024597
Exosome complex component RRP4.
    
 0.728
BpHYR1_018228
Exosome complex component RRP41-like.
    
  0.707
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.