STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_021542Putative chitinase 3. (560 aa)    
Predicted Functional Partners:
BpHYR1_028401
Mitochondrial cytochrome c oxidase subunit Vb.
   
 0.652
BpHYR1_024000
Cytochrome c oxidase subunit mitochondrial.
   
 0.636
BpHYR1_036973
Cytochrome c oxidase subunit mitochondrial.
   
 0.617
BpHYR1_030114
Cytochrome c oxidase subunit mitochondrial-like; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.611
BpHYR1_008475
Cytochrome c oxidase assembly factor 6-like protein.
   
  0.608
BpHYR1_014513
Cytochrome c oxidase subunit 6B1-like.
   
  0.608
BpHYR1_006056
Cytochrome c oxidase subunit 4 isoform mitochondrial-like.
   
 0.588
BpHYR1_027363
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
    
 0.561
BpHYR1_042856
Von Willebrand factor type EGF and pentraxin domain-containing 1.
    
 0.554
BpHYR1_032989
Von Willebrand factor type EGF and pentraxin domain-containing 1-like.
    
 0.554
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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