STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_036977Collagen alpha-5(VI) chain-like. (705 aa)    
Predicted Functional Partners:
BpHYR1_030790
Muscle M-line assembly unc-89 isoform X7.
    
 0.856
BpHYR1_046798
Muscle M-line assembly unc-89.
    
 0.856
BpHYR1_029124
Muscle M-line assembly unc-89-like.
    
 0.856
BpHYR1_020072
Titin isoform X5.
    
 0.856
BpHYR1_020076
Muscle M-line assembly unc-89.
    
 0.856
BpHYR1_006593
Putative serine threonine-kinase pats1.
    
 0.766
BpHYR1_035183
Leucine-rich repeat serine threonine-kinase 1.
    
 0.766
BpHYR1_046054
Telomerase component 1-like.
    
 0.742
BpHYR1_010963
Ceroid-lipofuscinosis neuronal 6.
    
 0.740
BpHYR1_031586
Coiled-coil domain-containing protein.
    
 0.699
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.