STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_031829Golgin subfamily A member 2. (650 aa)    
Predicted Functional Partners:
BpHYR1_035091
Syntaxin-5; Belongs to the syntaxin family.
   
 0.993
BpHYR1_016587
Golgi reassembly-stacking 2-like.
    
 0.978
BpHYR1_040968
General vesicular transport factor p115-like protein.
   
 0.929
BpHYR1_010804
Uncharacterized protein.
    
 0.928
BpHYR1_002514
Ras-related Rab-1A.
    
 0.890
BpHYR1_019323
Src substrate cortactin isoform X4.
   
 
 0.789
BpHYR1_027955
Golgin subfamily A member 4 isoform X2.
   
 
 0.789
BpHYR1_001131
Uncharacterized protein.
   
 
 0.789
BpHYR1_023553
Thyroid receptor-interacting 11.
   
 
 0.786
BpHYR1_041290
Ergic-53.
   
 
 0.785
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.