STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_044481Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)    
Predicted Functional Partners:
BpHYR1_039507
Ubiquitin-conjugating enzyme E2 variant 1.
   
0.996
BpHYR1_041824
Ubiquitin-60S ribosomal L40.
   
 0.990
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.965
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
   
 0.962
BpHYR1_052182
E3 ubiquitin-ligase TRIP12-like isoform X4.
    
 0.958
BpHYR1_005613
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.957
BpHYR1_016063
Ubiquitin-like modifier-activating enzyme 6.
   
 0.957
BpHYR1_052307
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.957
BpHYR1_006647
S-phase kinase-associated 1; Belongs to the SKP1 family.
    
 0.914
BpHYR1_029847
Ubiquitin-conjugating enzyme E2 J2.
    
0.895
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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