STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_004767PERQ amino acid-rich with GYF domain-containing 1 isoform X1. (650 aa)    
Predicted Functional Partners:
BpHYR1_049197
ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
    
 
 0.903
BpHYR1_021631
Eukaryotic translation initiation factor 4E type 2 isoform X3; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.890
BpHYR1_010073
Zinc finger protein 598-like.
    
 
 0.644
BpHYR1_039374
Ras-associated and pleckstrin homology domains-containing 1-like isoform X1.
    
 
 0.634
BpHYR1_008143
Cyclin-G-associated kinase.
   
  
 0.480
BpHYR1_016117
Cyclin-G-associated kinase.
   
  
 0.480
BpHYR1_049380
PAT1-like protein.
    
 
 0.460
BpHYR1_037919
Msx2-interacting-like isoform X1.
    
 
 0.446
BpHYR1_004102
CCR4-NOT transcription complex subunit 7 isoform X2.
   
 
 0.444
BpHYR1_031762
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.417
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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