Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BpHYR1_004102 | BpHYR1_004767 | A0A3M7P2V7 | A0A3M7SZN6 | CCR4-NOT transcription complex subunit 7 isoform X2. | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | 0.444 |
BpHYR1_004102 | BpHYR1_049197 | A0A3M7P2V7 | A0A3M7QCP0 | CCR4-NOT transcription complex subunit 7 isoform X2. | ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family. | 0.987 |
BpHYR1_004102 | BpHYR1_049380 | A0A3M7P2V7 | A0A3M7RDP3 | CCR4-NOT transcription complex subunit 7 isoform X2. | PAT1-like protein. | 0.991 |
BpHYR1_004767 | BpHYR1_004102 | A0A3M7SZN6 | A0A3M7P2V7 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | CCR4-NOT transcription complex subunit 7 isoform X2. | 0.444 |
BpHYR1_004767 | BpHYR1_008143 | A0A3M7SZN6 | A0A3M7PBX0 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | Cyclin-G-associated kinase. | 0.480 |
BpHYR1_004767 | BpHYR1_010073 | A0A3M7SZN6 | A0A3M7QRQ0 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | Zinc finger protein 598-like. | 0.644 |
BpHYR1_004767 | BpHYR1_016117 | A0A3M7SZN6 | A0A3M7QQB9 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | Cyclin-G-associated kinase. | 0.480 |
BpHYR1_004767 | BpHYR1_021631 | A0A3M7SZN6 | A0A3M7RUT1 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | Eukaryotic translation initiation factor 4E type 2 isoform X3; Belongs to the eukaryotic initiation factor 4E family. | 0.890 |
BpHYR1_004767 | BpHYR1_031762 | A0A3M7SZN6 | A0A3M7QQ65 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.417 |
BpHYR1_004767 | BpHYR1_037919 | A0A3M7SZN6 | A0A3M7QEM3 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | Msx2-interacting-like isoform X1. | 0.446 |
BpHYR1_004767 | BpHYR1_039374 | A0A3M7SZN6 | A0A3M7SUF7 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | Ras-associated and pleckstrin homology domains-containing 1-like isoform X1. | 0.634 |
BpHYR1_004767 | BpHYR1_049197 | A0A3M7SZN6 | A0A3M7QCP0 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family. | 0.903 |
BpHYR1_004767 | BpHYR1_049380 | A0A3M7SZN6 | A0A3M7RDP3 | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | PAT1-like protein. | 0.460 |
BpHYR1_008143 | BpHYR1_004767 | A0A3M7PBX0 | A0A3M7SZN6 | Cyclin-G-associated kinase. | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | 0.480 |
BpHYR1_008143 | BpHYR1_016117 | A0A3M7PBX0 | A0A3M7QQB9 | Cyclin-G-associated kinase. | Cyclin-G-associated kinase. | 0.994 |
BpHYR1_010073 | BpHYR1_004767 | A0A3M7QRQ0 | A0A3M7SZN6 | Zinc finger protein 598-like. | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | 0.644 |
BpHYR1_010073 | BpHYR1_021631 | A0A3M7QRQ0 | A0A3M7RUT1 | Zinc finger protein 598-like. | Eukaryotic translation initiation factor 4E type 2 isoform X3; Belongs to the eukaryotic initiation factor 4E family. | 0.671 |
BpHYR1_010073 | BpHYR1_031762 | A0A3M7QRQ0 | A0A3M7QQ65 | Zinc finger protein 598-like. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.632 |
BpHYR1_016117 | BpHYR1_004767 | A0A3M7QQB9 | A0A3M7SZN6 | Cyclin-G-associated kinase. | PERQ amino acid-rich with GYF domain-containing 1 isoform X1. | 0.480 |
BpHYR1_016117 | BpHYR1_008143 | A0A3M7QQB9 | A0A3M7PBX0 | Cyclin-G-associated kinase. | Cyclin-G-associated kinase. | 0.994 |
page 1 of 2