STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_053885Methyltransf_11 domain-containing protein. (304 aa)    
Predicted Functional Partners:
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.993
BpHYR1_027209
40S ribosomal S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.922
BpHYR1_014586
40S ribosomal S10b.
   
 0.912
BpHYR1_021185
40S ribosomal S11.
   
 0.912
BpHYR1_011312
40S ribosomal S20.
  
 0.905
BpHYR1_021719
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.903
BpHYR1_026704
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.901
BpHYR1_010284
40S ribosomal S3.
   
 0.898
BpHYR1_046062
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.898
BpHYR1_036074
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.897
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.