STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_021211Thyroid hormone receptor beta isoform X3. (522 aa)    
Predicted Functional Partners:
BpHYR1_026177
Retinoic acid receptor RXR.
  
0.977
BpHYR1_046337
Nuclear receptor corepressor 1-like.
    
 0.928
BpHYR1_008284
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.855
BpHYR1_009846
CREB-binding-like isoform X2.
    
 0.737
BpHYR1_020463
Pre-mRNA-splicing factor RBM22.
   
 0.707
BpHYR1_016368
Proteasome activator complex subunit 3 isoform X1.
   
  0.706
BpHYR1_053467
Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.678
BpHYR1_046097
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.663
BpHYR1_014665
Nuclear receptor subfamily 5 group A member 2-like.
   
0.650
BpHYR1_038901
Nuclear receptor subfamily 4 group A member.
    
0.643
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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