STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_040482Lactosylceramide 4-alpha-galactosyltransferase-like. (378 aa)    
Predicted Functional Partners:
BpHYR1_046645
Alpha-galactosidase.
     
 0.831
BpHYR1_004280
Beta-hexosaminidase.
   
 
  0.672
BpHYR1_013308
Beta-hexosaminidase subunit beta-like.
   
 
  0.672
BpHYR1_020391
Beta-hexosaminidase.
   
 
  0.672
BpHYR1_009509
Beta-hexosaminidase.
   
 
  0.672
BpHYR1_042977
Hexosyltransferase.
   
 
 0.668
BpHYR1_027874
Hexosyltransferase.
   
 
 0.668
BpHYR1_007370
Hexosyltransferase.
   
 
 0.668
BpHYR1_005605
Hexosyltransferase.
   
 
 0.668
BpHYR1_046565
Hexosyltransferase.
   
 
 0.668
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.